| Protein: | PTR2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 585 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTR2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
368.0 | [0..1] | [585..1] |
|
Region A: Residues: [1-466] |
1 11 21 31 41 51
| | | | | |
1 MGSIEEEARP LIEEGLILQE VKLYAEDGSV DFNGNPPLKE KTGNWKACPF ILGNECCERL 60
61 AYYGIAGNLI TYLTTKLHQG NVSAATNVTT WQGTCYLTPL IGAVLADAYW GRYWTIACFS 120
121 GIYFIGMSAL TLSASVPALK PAECIGDFCP SATPAQYAMF FGGLYLIALG TGGIKPCVSS 180
181 FGADQFDDTD SRERVRKASF FNWFYFSINI GALVSSSLLV WIQENRGWGL GFGIPTVFMG 240
241 LAIASFFFGT PLYRFQKPGG SPITRISQVV VASFRKSSVK VPEDATLLYE TQDKNSAIAG 300
301 SRKIEHTDDC QYLDKAAVIS EEESKSGDYS NSWRLCTVTQ VEELKILIRM FPIWASGIIF 360
361 SAVYAQMSTM FVQQGRAMNC KIGSFQLPPA ALGTFDTASV IIWVPLYDRF IVPLARKFTG 420
421 VDKGFTEIQR MGIGLFVSVL CMAAAAIVEI IRLHMANDLG LVESGA
|
| Detection Method: |  |
| Confidence: | 5.522879 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| binding | 1.26757615356623 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
|
Region A: Residues: [467-585] |
1 11 21 31 41 51
| | | | | |
1 PVPISVLWQI PQYFILGAAE VFYFIGQLEF FYDQSPDAMR SLCSALALLT NALGNYLSSL 60
61 ILTLVTYFTT RNGQEGWISD NLNSGHLDYF FWLLAGLSLV NMAVYFFSAA RYKQKKASS
|
| Detection Method: | |
| Confidence: | 1.14 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
| Matching Structure (courtesy of the PDB): |
|
