| Protein: | POT11_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 792 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for POT11_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
670.0 | [0..1] | [792..1] |
|
|
653.0 | [0..14] | [792..4] |
|
|
640.0 | [0..14] | [792..4] |
|
|
632.0 | [0..36] | [792..1] |
|
|
631.0 | [0..36] | [792..1] |
|
Region A: Residues: [1-126] |
1 11 21 31 41 51
| | | | | |
1 MAARVEAATM GGEIDEEESD ERGSMWDLDQ KLDQSMDEEA GRLRNMYREK KFSALLLLQL 60
61 SFQSLGVVYG DLGTSPLYVF YNTFPHGIKD PEDIIGALSL IIYSLTLIPL LKYVFVVCKA 120
121 NDNGQG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [127-531] |
1 11 21 31 41 51
| | | | | |
1 GTFALYSLLC RHAKVKTIQN QHRTDEELTT YSRTTFHEHS FAAKTKRWLE KRTSRKTALL 60
61 ILVLVGTCMV IGDGILTPAI SVLSAAGGLR VNLPHISNGV VVFVAVVILV SLFSVQHYGT 120
121 DRVGWLFAPI VFLWFLSIAS IGMYNIWKHD TSVLKAFSPV YIYRYFKRGG RDRWTSLGGI 180
181 MLSITGIEAL FADLSHFPVS AVQIAFTVIV FPCLLLAYSG QAAYIRRYPD HVADAFYRSI 240
241 PGSVYWPMFI IATAAAIVAS QATISATFSL VKQALAHGCF PRVKVVHTSR KFLGQIYVPD 300
301 INWILMILCI AVTAGFKNQS QIGNAYGTAV VIVMLVTTLL MTLIMILVWR CHWVLVLIFT 360
361 VLSLVVECTY FSAMLFKIDQ GGWVPLVIAA AFLLIMWVWH YGTLK
|
| Detection Method: | |
| Confidence: | 3.221849 |
| Match: | 1ar1A |
| Description: | Bacterial aa3 type cytochrome c oxidase subunit I |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [532-600] |
1 11 21 31 41 51
| | | | | |
1 RYEFEMHCRV SMAWILGLGP SLGLVRVPGV GLVYTELASG VPHIFSHFIT NLPAIHSVVV 60
61 FVCVKNLPV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.926 | d.58.11 | EF-G/eEF-2 domains III and V |
|
Region A: Residues: [601-702] |
1 11 21 31 41 51
| | | | | |
1 YTVPEEERFL VKRIGPKNFH MFRCVARYGY RDLHKKDDDF EKRLFESLFL YVRLESMMEG 60
61 GCSDSDDYSI CGSQQQLKDT LGNGNENENL ATFDTFDSIE SI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [703-792] |
1 11 21 31 41 51
| | | | | |
1 TPVKRVSNTV TASSQMSGVD ELEFINGCRD AGVVHIMGNT VVRARREARF YKKIAIDYVY 60
61 AFLRKICREH SVIYNVPQES LLNVGQIFYV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
