| Protein: | PSBQ2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 230 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSBQ2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
282.0 | [0..5] | [230..1] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MAQAVTSMAG LRGASQAVLE GSLQINGSNR LNISRVSVGS QRTGLVIRAQ QNVSVPESSR 60
61 RSVIGLVAAG LAGGSFVKAV FAEAIPIKVG GPP
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.593 | d.58.42 | N-utilization substance G protein NusG, N-terminal domain |
| View | Download | 0.542 | b.36.1 | PDZ domain-like |
| View | Download | 0.524 | d.58.49 | YajQ-like |
| View | Download | 0.498 | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.488 | d.50.1 | dsRNA-binding domain-like |
|
Region A: Residues: [94-230] |
1 11 21 31 41 51
| | | | | |
1 LPSGGLPGTD NSDQARDFSL ALKDRFYIQP LSPTEAAARA KDSAKEIINV KSFIDKKAWP 60
61 YVQNDLRLRA SYLRYDLNTV ISAKPKEEKQ SLKDLTAKLF QTIDNLDYAA RSKSSPDAEK 120
121 YYSETVSSLN NVLAKLG
|
| Detection Method: | |
| Confidence: | 45.154902 |
| Match: | 1nzeA |
| Description: | Crystal structure of PsbQ polypeptide of photosystem II from higher plants |
Matching Structure (courtesy of the PDB): |
|
