| Protein: | PSQ1_ARATH, PSBQ... |
| Organism: | Arabidopsis thaliana |
| Length: | 223 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSQ1_ARATH, PSBQ....
| Description | E-value | Query Range |
Subject Range |
|
|
295.0 | [0..1] | [223..1] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MASMGGLHGA SPAVLEGSLK INGSSRLNGS GRVAVAQRSR LVVRAQQSEE TSRRSVIGLV 60
61 AAGLAGGSFV QAVLADA
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.639 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.629 | N/A | N/A | d.222.1 | YbaB-like |
| View | Download | 0.625 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.624 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.586 | N/A | N/A | d.58.17 | Metal-binding domain |
|
Region A: Residues: [78-223] |
1 11 21 31 41 51
| | | | | |
1 ISIKVGPPPA PSGGLPGTDN SDQARDFALA LKDRFYLQPL PPTEAAARAK ESAKDIINVK 60
61 PLIDRKAWPY VQNDLRSKAS YLRYDLNTII SSKPKDEKKS LKDLTTKLFD TIDNLDYAAK 120
121 KKSPSQAEKY YAETVSALNE VLAKLG
|
| Detection Method: | |
| Confidence: | 46.30103 |
| Match: | 1nzeA |
| Description: | Crystal structure of PsbQ polypeptide of photosystem II from higher plants |
Matching Structure (courtesy of the PDB): |
|
