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View Structure Prediction Details

Protein: PSBO2_ARATH
Organism: Arabidopsis thaliana
Length: 331 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSBO2_ARATH.

Description E-value Query
Range
Subject
Range
gi|30013657 - gi|30013657|gb|AAP03871.1| oxygen evolving complex 33 kDa photosystem II protein [Nicotiana tabacum...
564.0 [0..1] [331..1]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSLQAAAT FLQPAKIAAS PSRNVHLRSN QTVGKSFGLD SSQARLTCSL HSDLKDFAGK  60
   61 CSDAAKIAGF ALATSALVVS GAG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [84-331]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AEGAPKRLTY DEIQSKTYME VKGTGTANQC PTIDGGSETF SFKAGKYTGK KFCFEPTSFT  60
   61 VKADSVSKNA PPDFQNTKLM TRLTYTLDEI EGPFEVGSDG SVKFKEEDGI DYAAVTVQLP 120
  121 GGERVPFLFT VKQLEASGKP ESFSGKFLVP SYRGSSFLDP KGRGGSTGYD NAVALPAGGR 180
  181 GDEEELSKEN VKNTAASVGE ITLKITKSKP ETGEVIGVFE SLQPSDTDLG AKVPKDVKIQ 240
  241 GVWYGQIE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.154902
Match: 1s5lO
Description: Architecture of the photosynthetic oxygen evolving center
Matching Structure (courtesy of the PDB):

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