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View Structure Prediction Details

Protein: PSBR_ARATH
Organism: Arabidopsis thaliana
Length: 140 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSBR_ARATH.

Description E-value Query
Range
Subject
Range
gi|967968 - gi|967968|gb|AAA74957.1| photosystem II 10kDa polypeptide
PSBR_BRACM - Photosystem II 10 kDa polypeptide, chloroplastic OS=Brassica campestris GN=PSBR PE=2 SV=1
gi|967968|gb|AAA... - photosystem II 10kDa polypeptide
235.0 [0..1] [140..1]

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Predicted Domain #1
Region A:
Residues: [1-140]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASVMLSSV TLKPAGFTVE KTAARGLPSL TRARPSFKIV ASGVKKIKTD KPFGINGSMD  60
   61 LRDGVDASGR KGKGYGVYKY VDKYGANVDG YSPIYNENEW SASGDVYKGG VTGLAIWAVT 120
  121 LAGILAGGAL LVYNTSALAQ 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 68.886057
Match: PF04725.3
Description: No description for PF04725.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle