YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: PSAL_ARATH
Organism: Arabidopsis thaliana
Length: 219 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSAL_ARATH.

Description E-value Query
Range
Subject
Range
gi|29468504 - gi|29468504|gb|AAO85557.1| photosystem I subunit XI [Nicotiana attenuata]
284.0 [0..1] [219..1]

Back

Predicted Domain #1
Region A:
Residues: [1-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASASPMAS QLRSSFSSAS LSQRLAVPKG ISGAPFGVSP TKRVSSFTVR AVKSDKTTFQ  60
   61 VVQPINGDPF IGSLETPVTS SPLIAWYLSN LPGYRTAVNP LLRGVEVGLA HGFFLVGPFV 120
  121 KAGPLRNTAY AGSAGSLAAA GLVVILSMCL TIYGISSFKE GEPSIAPSLT LTGRKKQPDQ 180
  181 LQTADGWAKF TGGFFFGGIS GVTWAYFLLY VLDLPYFVK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.522879
Match: 2o01L
Description: No description for 2o01L was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle