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View Structure Prediction Details

Protein: POT6_ARATH
Organism: Arabidopsis thaliana
Length: 782 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for POT6_ARATH.

Description E-value Query
Range
Subject
Range
gi|14091469 - gi|14091469|gb|AAK53758.1|AF367864_1 putative potassium transporter HAK1p [Mesembryanthemum crystall...
676.0 [0..1] [782..1]
gi|60101762 - gi|60101762|gb|AAX13997.1| putative high-affinity potassium transporter protein [Phytolacca acinosa]
673.0 [0..1] [782..1]
gi|34395199, gi|... - gi|50939843|ref|XP_479449.1| putative potassium transporter [Oryza sativa (japonica cultivar-group)]...
gi|125559548 - gi|125559548|gb|EAZ05084.1| hypothetical protein OsI_27274 [Oryza sativa Indica Group]
672.0 [0..1] [782..1]
gi|92019691 - gi|92019691|dbj|BAE93236.1| potassium transporter [Phragmites australis]
667.0 [0..1] [782..1]
HAK7_ORYSJ - Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3
HAK7_ORYSA - Potassium transporter 7 (OsHAK7) - Oryza sativa (Rice)
663.0 [0..8] [782..40]
gi|7108599 - gi|7108599|gb|AAF36491.1|AF129479_1 HAK2 [Hordeum vulgare subsp. vulgare]
652.0 [0..9] [782..6]
gi|93138735 - gi|93138735|gb|ABE99812.1| potassium transporter HAK4 [Hordeum vulgare]
651.0 [0..11] [782..15]
gi|112259089 - gi|112259089|gb|ABI14646.1| putative high-affinity potassium transporter protein 1 [Nicotiana tabacu...
644.0 [0..12] [782..21]

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Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIESGSYQN AKKESWRTVL TLAYQSLGVV YGDLSISPLY VYKSTFAEDI HHSESNEEIF  60
   61 GVLSFIFWTI TLVPLLKYVF IVLRADDNGE GGTFALYSLL CRHARVNSLP SCQLADEQLI 120
  121 EYKTDSIGSS SMPQSGFAAS LKSTLEKH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [149-326]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVLQKILLVL ALIGTCMVIG DGVLTPAISV FSAVSGVELS MSKEHHKYIE LPAACVILIG  60
   61 LFALQHYGTH RVGFLFAPVI LLWLMCISAI GVYNIFHWNP HVYQALSPYY MYKFLKKTQS 120
  121 RGWMSLGGIL LCITGSEAMF ADLGHFSQLS IKIAFTSLVY PSLILAYMGQ AAYLSQHH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [327-514]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IIESEYNIGF YVSVPERLRW PVLVIAILAA VVGSQAIITG TFSIIKQCSA LGCFPKVKIV  60
   61 HTSSKIHGQI YIPEINWILM VLCLAVTIGF RDTKRLGNAS GLAVITVMLV TTCLMSLVIV 120
  121 LCWHKSVIFA IVFVVFFGTI ESLYFSASLI KFLEGAWVPI ALAFCFLLAM CTWHYGTLKR 180
  181 YEYDVQNK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [515-674]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSVNWLLSLS QTLGIARVRG LGLIHTELVS GVPAIFSHFV TNLPAFHQVL VFLCVKSVPV  60
   61 PHVRPQERFL VGRIGPKEFR IYRCIVRFGY RDVHKDDFEF EGDLVCSIAE FIRTEAETAA 120
  121 TAAETNGEDD DRMSVVGTCS TYMQGIEDHY ESDIDDPDKP 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [675-782]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTSEIRSPKP KKKSKSKVKK RVRFVVPETP KIEKETRQEL MELTEAREGG VAYIMGNAYM  60
   61 KAKPGSGLLK RLAINIGYEF LRRNTRGPRN MLTSPHASTL EVGMIYNV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle