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View Structure Prediction Details

Protein: POT5_ARATH
Organism: Arabidopsis thaliana
Length: 785 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for POT5_ARATH.

Description E-value Query
Range
Subject
Range
gi|34395199, gi|... - gi|50939843|ref|XP_479449.1| putative potassium transporter [Oryza sativa (japonica cultivar-group)]...
gi|125559548 - gi|125559548|gb|EAZ05084.1| hypothetical protein OsI_27274 [Oryza sativa Indica Group]
643.0 [0..38] [785..1]
gi|92019685 - gi|92019685|dbj|BAE93235.1| potassium transporter [Phragmites australis]
634.0 [0..38] [785..1]
gi|14091469 - gi|14091469|gb|AAK53758.1|AF367864_1 putative potassium transporter HAK1p [Mesembryanthemum crystall...
633.0 [0..41] [785..1]
gi|18138061 - gi|18138061|emb|CAD20577.1| putative potassium transporter [Vicia faba]
628.0 [0..1] [785..26]
HAK7_ORYSJ - Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3
HAK7_ORYSA - Potassium transporter 7 (OsHAK7) - Oryza sativa (Rice)
628.0 [0..47] [785..40]
gi|7108599 - gi|7108599|gb|AAF36491.1|AF129479_1 HAK2 [Hordeum vulgare subsp. vulgare]
627.0 [0..48] [785..5]
gi|93138735 - gi|93138735|gb|ABE99812.1| potassium transporter HAK4 [Hordeum vulgare]
620.0 [0..36] [785..1]
gi|60101762 - gi|60101762|gb|AAX13997.1| putative high-affinity potassium transporter protein [Phytolacca acinosa]
620.0 [0..45] [785..4]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGEEHQIDG DEVNNHENKL NEKKKSWGKL YRPDSFIIEA GQTPTNTGRR SLMSWRTTMS  60
   61 LAFQSLGVVY GDIGTSPLYV YASTFTDGIN DKDDVVGVLS LIIYTITLVA LLKYVFIVLQ 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [121-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANDNGEGGTF ALYSLICRYA KMGLIPNQEP EDVELSNYTL ELPTTQLRRA HMIKEKLENS  60
   61 KFAKIILFLV TIMGTSMVIG DGILTPSISV LSAVSGIKSL GQNTVVGVSV AILIVLFAFQ 120
  121 RFGTDKVGFS FAPIILVWFT FLIGIGLFNL FKHDITVLKA LNPLYIIYYF RRT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [294-401]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRQGWISLGG VFLCITGTEA MFADLGHFSV RAVQISFSCV AYPALVTIYC GQAAYLTKHT  60
   61 YNVSNTFYDS IPDPLYWPTF VVAVAASIIA SQAMISGAFS VISQSLRM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [402-538]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GCFPRVKVVH TSAKYEGQVY IPEINYLLML ACIAVTLAFR TTEKIGHAYG IAVVTVMVIT  60
   61 TLMVTLIMLV IWKTNIVWIA IFLVVFGSIE MLYLSSVMYK FTSGGYLPLT ITVVLMAMMA 120
  121 IWQYVHVLKY RYELREK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [539-711]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ISRENAIQMA TSPDVNRVPG IGLFYTELVN GITPLFSHYI SNLSSVHSVF VLISIKTLPV  60
   61 NRVTSSERFF FRYVGPKDSG MFRCVVRYGY KEDIEEPDEF ERHFVYYLKE FIHHEHFMSG 120
  121 GGGEVDETDK EEEPNAETTV VPSSNYVPSS GRIGSAHSSS SDKIRSGRVV QVQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [712-785]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVEDQTELVE KAREKGMVYL MGETEITAEK ESSLFKKFIV NHAYNFLKKN CREGDKALAI  60
   61 PRSKLLKVGM TYEL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle