| Protein: | POT4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 789 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for POT4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
691.0 | [0..14] | [789..9] |
|
|
688.0 | [0..3] | [789..2] |
|
|
681.0 | [0..15] | [789..10] |
|
|
679.0 | [0..15] | [789..5] |
|
|
679.0 | [0..18] | [789..16] |
|
|
678.0 | [0..8] | [782..4] |
|
|
676.0 | [0..16] | [789..41] |
|
|
669.0 | [0..15] | [789..10] |
|
Region A: Residues: [1-511] |
1 11 21 31 41 51
| | | | | |
1 MAPAESGVSP RRNPSQLSWM NLSSNLILAY QSFGVVYGDL STSPLYVFPS TFIGKLHKHH 60
61 NEDAVFGAFS LIFWTLTLIP LLKYLLVLLS ADDNGEGGTF ALYSLLCRHA KLSLLPNQQA 120
121 ADEELSAYKF GPSTDTVTSS PFRTFLEKHK RLRTALLLVV LFGAAMVIGD GVLTPALSVL 180
181 SSLSGLQATE KNVTDGELLV LACVILVGLF ALQHCGTHRV AFMFAPIVII WLISIFFIGL 240
241 YNIIRWNPKI IHAVSPLYII KFFRVTGQDG WISLGGVLLS VTGTEAMFAN LGHFTSVSIR 300
301 VAFAVVVYPC LVVQYMGQAA FLSKNLGSIP NSFYDSVPDP VFWPVFVIAT LAAIVGSQAV 360
361 ITTTFSIIKQ CHALGCFPRI KVVHTSKHIY GQIYIPEINW ILMILTLAMA IGFRDTTLIG 420
421 NAYGIACMVV MFITTFFMAL VIVVVWQKSC FLAALFLGTL WIIEGVYLSA ALMKVTEGGW 480
481 VPFVLTFIFM IAMYVWHYGT RRKYSFDLHN K
|
| Detection Method: |  |
| Confidence: | 1.01 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [512-687] |
1 11 21 31 41 51
| | | | | |
1 VSLKWLLGLG PSLGIVRVPG IGLVYSELAT GVPAIFSHFV TNLPAFHKVV VFVCVKSVPV 60
61 PHVSPEERFL IGRVCPKPYR MYRCIVRYGY KDIQREDGDF ENQLVQSIAE FIQMEASDLQ 120
121 SSASESQSND GRMAVLSSQK SLSNSILTVS EVEEIDYADP TIQSSKSMTL QSLRSV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [688-789] |
1 11 21 31 41 51
| | | | | |
1 YEDEYPQGQV RRRHVRFQLT ASSGGMGSSV REELMDLIRA KEAGVAYIMG HSYVKSRKSS 60
61 SWLKKMAIDI GYSFLRKNCR GPAVALNIPH ISLIEVGMIY YV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.647 | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.647 | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.561 | d.64.2 | Description not found. |
| View | Download | 0.554 | d.129.2 | Phosphoglucomutase, C-terminal domain |
| View | Download | 0.552 | a.29.2 | Bromodomain |
| View | Download | 0.550 | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| View | Download | 0.543 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.472 | a.29.2 | Bromodomain |
| View | Download | 0.462 | d.141.1 | Ribosomal protein L6 |
