| Protein: | POT3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 775 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for POT3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
702.0 | [0..5] | [775..15] |
|
|
698.0 | [0..5] | [775..17] |
|
|
697.0 | [0..5] | [775..45] |
|
|
690.0 | [0..4] | [775..11] |
|
|
687.0 | [0..5] | [775..15] |
|
|
681.0 | [0..4] | [775..10] |
|
|
679.0 | [0..3] | [768..13] |
|
Region A: Residues: [1-497] |
1 11 21 31 41 51
| | | | | |
1 MADRRNRCNQ ILLLAYQSFG LVFGDLSISP LYVYKCTFYG GLRHHQTEDT IFGAFSLIFW 60
61 TITLLSLIKY MVFVLSADDN GEGGIFALYA LLCRHARFSL LPNQQAADEE ISTYYGPGDA 120
121 SRNLPSSAFK SLIERNKRSK TALLVLVLVG TSMVITIGVL TPAISVSSSI DGLVAKTSLK 180
181 HSTVVMIACA LLVGLFVLQH RGTNKVAFLF APIMILWLLI IATAGVYNIV TWNPSVYKAL 240
241 SPYYIYVFFR DTGIDGWLSL GGILLCITGT EAIFAELGQF TATSIRFAFC CVVYPCLVLQ 300
301 YMGQAAFLSK NFSALPSSFY SSIPDPFFWP VLMMAMLAAM VASQAVIFAT FSIVKQCYAL 360
361 GCFPRVKIVH KPRWVLGQIY IPEINWVVMI LTLAVTICFR DTRHIAFAFG LACMTLAFVT 420
421 TWLMPLIINF VWNRNIVFSV LFILFFGTIE LIFVASALVK IPKGGWITLL LSLFFTFITY 480
481 VWHYGSRKKY LCDQHNK
|
| Detection Method: |  |
| Confidence: | 1.1 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [498-669] |
1 11 21 31 41 51
| | | | | |
1 VPMKSILSLG PSLGIIKVPG MGLIYTELAS GVPATFKHFL TNLPAFYQVV VFVCCKTVPI 60
61 PYVPQKERYL IGRIGPKTYR MYRCIIRAGY KDVNKDGDDF EDELVMSIAE FIQLESEGYG 120
121 GSNTDRSIDG RLAVVKASNK FGTRLSRSIS EANIAGSSRS QTTVTNSKSP AL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.630 | d.15.5 | Staphylokinase/streptokinase |
| View | Download | 0.555 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.552 | d.15.6 | Superantigen toxins, C-terminal domain |
| View | Download | 0.529 | b.1.2 | Fibronectin type III |
| View | Download | 0.511 | d.15.4 | 2Fe-2S ferredoxin-like |
| View | Download | 0.311 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.222 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.218 | c.55.4 | Translational machinery components |
| View | Download | 0.214 | d.58.14 | Ribosomal protein S6 |
|
Region A: Residues: [670-775] |
1 11 21 31 41 51
| | | | | |
1 LKLRAEYEQE LPRLSMRRMF QFRPMDTKFR QPQVKEELFD LVNAKDAEVA YIVGHGHVKA 60
61 KRNSVFVKQL VVNVAYSFLR KNCRSPGVML NIPHICLIKV GMNYYL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.628 | a.29.14 | Description not found. |
| View | Download | 0.584 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.530 | d.129.2 | Phosphoglucomutase, C-terminal domain |
| View | Download | 0.514 | a.29.16 | Description not found. |
| View | Download | 0.499 | a.2.5 | Prefoldin |
| View | Download | 0.499 | a.2.5 | Prefoldin |
| View | Download | 0.497 | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| View | Download | 0.469 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.458 | d.58.48 | MTH1187-like |
| View | Download | 0.439 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.438 | d.52.8 | Description not found. |
| View | Download | 0.430 | d.58.48 | MTH1187-like |
| View | Download | 0.428 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.319 | d.52.8 | Description not found. |
| View | Download | 0.316 | d.58.4 | Dimeric alpha+beta barrel |
