| Protein: | POT2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 794 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for POT2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
687.0 | [0..1] | [794..1] |
|
|
682.0 | [0..1] | [794..1] |
|
|
678.0 | [0..1] | [794..1] |
|
|
675.0 | [0..1] | [794..1] |
|
|
673.0 | [0..1] | [794..1] |
|
|
667.0 | [0..12] | [794..41] |
|
|
663.0 | [0..1] | [787..1] |
|
Region A: Residues: [1-511] |
1 11 21 31 41 51
| | | | | |
1 MDLNLGKCCG SRSSKKESWR SVLLLAYQSL GVVYGDLSIS PLYVFKSTFA EDIQHSETNE 60
61 EIYGVMSFVF WTLTLVPLLK YVFIVLRADD NGEGGTFALY SLICRHVKVS LLPNRQVSDE 120
121 ALSTYKLEHP PEKNHDSCVK RYLEKHKWLH TALLLLVLLG TCMVIGDGLL TPAISVFSAV 180
181 SGLELNMSKE HHQYAVIPIT CFILVCLFSL QHFGTHRVGF VFAPIVLTWL LCISGIGLYN 240
241 IIQWNPHIYK ALSPTYMFMF LRKTRVSGWM SLGGILLCIT GAEAMFADLG HFNYAAIQIA 300
301 FTFLVYPALI LAYMGQAAYL SRHHHSAHAI GFYVSVPKCL HWPVLAVAIL ASVVGSQAII 360
361 SGTFSIINQS QSLGCFPRVK VIHTSDKMHG QIYIPEINWM LMILCIAVTI GFRDVKHLGN 420
421 ASGLAVMAVM LVTTCLTSLV IVLCWHKPPI LALAFLLFFG SIELLYFSAS LTKFREGAWL 480
481 PILLSLIFMI IMFVWHYTTI KKYEFDLQNK V
|
| Detection Method: |  |
| Confidence: | 0.952 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [512-664] |
1 11 21 31 41 51
| | | | | |
1 SLEWLLALGP SLGISRVPGI GLVFTDLTSG IPANFSRFVT NLPAFHRVLV FVCVKSVPVP 60
61 FVPPAERYLV GRVGPVDHRS YRCIVRYGYR DVHQDVDSFE TELVSKLADF IRYDWHKRTQ 120
121 QEDDNARSVQ SNESSSESRL AVIGTVAYEI EDN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [665-794] |
1 11 21 31 41 51
| | | | | |
1 LQPESVSIGF STVESMEDVI QMAEPAPTAT IRRVRFAVEE NSYEDEGSTS SAEADAELRS 60
61 ELRDLLAAQE AGTAFILGHS HVKAKQGSSV MKRLAVNFGY NFLRRNCRGP DVALKVPPVS 120
121 LLEVGMVYVV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.531 | a.79.1 | Antitermination factor NusB |
| View | Download | 0.527 | d.80.1 | Tautomerase/MIF |
| View | Download | 0.527 | d.80.1 | Tautomerase/MIF |
| View | Download | 0.511 | f.56.1 | Description not found. |
| View | Download | 0.485 | a.1.1 | Globin-like |
| View | Download | 0.485 | a.1.1 | Globin-like |
| View | Download | 0.478 | a.79.1 | Antitermination factor NusB |
| View | Download | 0.466 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.372 | a.1.1 | Globin-like |
| View | Download | 0.363 | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
