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View Structure Prediction Details

Protein: PORB_ARATH
Organism: Arabidopsis thaliana
Length: 401 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PORB_ARATH.

Description E-value Query
Range
Subject
Range
gi|21593167 - gi|21593167|gb|AAM65116.1| protochlorophyllide reductase precursor [Arabidopsis thaliana]
271.0 [0..1] [401..1]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALQAASLVS SAFSVRKDAK LNASSSSFKD SSLFGASITD QIKSEHGSSS LRFKREQSLR  60
   61 NLAIRAQTAA TSSPTVTKSV DGKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.69897
Match: 2z5lA
Description: No description for 2z5lA was found.

Predicted Domain #2
Region A:
Residues: [85-401]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLRKGNVVVT GASSGLGLAT AKALAETGKW NVIMACRDFL KAERAAKSVG MPKDSYTVMH  60
   61 LDLASLDSVR QFVDNFRRTE TPLDVLVCNA AVYFPTAKEP TYSAEGFELS VATNHLGHFL 120
  121 LARLLLDDLK KSDYPSKRLI IVGSITGNTN TLAGNVPPKA NLGDLRGLAG GLNGLNSSAM 180
  181 IDGGDFDGAK AYKDSKVCNM LTMQEFHRRF HEETGVTFAS LYPGCIASTG LFREHIPLFR 240
  241 ALFPPFQKYI TKGYVSETES GKRLAQVVSD PSLTKSGVYW SWNNASASFE NQLSEEASDV 300
  301 EKARKVWEIS EKLVGLA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.30103
Match: 2uvdA
Description: No description for 2uvdA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle