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View Structure Prediction Details

Protein: PLSB_ARATH
Organism: Arabidopsis thaliana
Length: 459 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLSB_ARATH.

Description E-value Query
Range
Subject
Range
gi|419754, gi|21... - pir||S31083 glycerol-3-phosphate O-acyltransferase (EC 2.3.1.15) precursor - Arabidopsis thaliana, g...
553.0 [0..1] [459..1]

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Predicted Domain #1
Region A:
Residues: [1-89]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLTFSSSAA TVAVAAATVT SSARVPVYPL ASSTLRGLVS FRLTAKKLFL PPLRSRGGVS  60
   61 VRAMSELVQD KESSVAASIA FNEAAGETP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [90-459]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SELSHSRTFL DARSEQDLLS GIKKEAEAGR LPANVAAGME ELYWNYKNAV LSSGASRADE  60
   61 TVVSNMSVAF DRMLLGVEDP YTFNPYHKAV REPFDYYMFV HTYIRPLIDF KNSYVGNASI 120
  121 FSELEDKIRQ GHNIVLISNH QSEADPAVIS LLLEAQSPFI GENIKCVAGD RVITDPLCKP 180
  181 FSMGRNLICV YSKKHMNDDP ELVDMKRKAN TRSLKEMATM LRSGGQLIWI APSGGRDRPN 240
  241 PSTGEWFPAP FDASSVDNMR RLVEHSGAPG HIYPMSLLCY DIMPPPPQVE KEIGEKRLVG 300
  301 FHGTGLSIAP EINFSDVTAD CESPNEAKEA YSQALYKSVN EQYEILNSAI KHRRGVEAST 360
  361 SRVSLSQPWN 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 135.0
Match: 1k30A
Description: Glycerol-3-phosphate (1)-acyltransferase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle