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View Structure Prediction Details

Protein: PLAS2_ARATH
Organism: Arabidopsis thaliana
Length: 167 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLAS2_ARATH.

Description E-value Query
Range
Subject
Range
gi|21592405 - gi|21592405|gb|AAM64356.1| plastocyanin, putative [Arabidopsis thaliana]
152.0 [0..1] [167..1]

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Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVTSATVA IPSFTGLKAS TIKSSATVRI QTAAVASPKL TVKSSLKNFG VAAVAAAASI  60
   61 ALAGNAMAIE VLLGGGDGSL AFIPNDFSIA KGEKIVFKNN AGYPHNVVFD EDEIPSGVDV 120
  121 AKISMDEQDL LNGAGETYEV ALTEPGTYSF YCAPHQGAGM VGKVTVN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.69897
Match: 1ag6A
Description: PLASTOCYANIN FROM SPINACH
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle