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View Structure Prediction Details

Protein: PLY21_ARATH
Organism: Arabidopsis thaliana
Length: 392 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLY21_ARATH.

Description E-value Query
Range
Subject
Range
PLY15_ARATH - Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1
439.0 [0..30] [392..103]

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Predicted Domain #1
Region A:
Residues: [1-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIVCTFFLF LLNTSFAFAF AIPKPPIVRR LSTTVTSNST ASSCSANGNP IDECWRCDEN  60
   61 WKDNRKNLAD CAVGFGRDSI GGRAGEFYTV TDSGDDNPLN PTPGTLRYAA TQDQPLWIIF 120
  121 DRDMVIQLKQ DLQVASYKTI DGRGNNVQIA YGPCLTLYKV SNIIINNLYI HDCVPVKRNA 180
  181 LSSLGGYSDG DGISIFESRD IWIDHCTLEK CYDGLIDAVN GSTDITISNS YMLNHNEVML 240
  241 LGHSDEYSGD RDMRVTIAFN YFGEGLVQRM PRCRHGYFHI VNNIYRDWKM YAIGGSANPT 300
  301 IFSQGNVFIA SNNQFTKEVT KRESADGDEE WKEWNWKSEG DEMVNGAFFT PSGKEDSPSY 360
  361 AKFSSMVARP ASLLKTTHPS VGVLSCEIDQ AC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.221849
Match: 1pxzA
Description: 1.7 Angstrom Crystal Structure of jun a 1, the major allergen from cedar pollen
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.142826098671881 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle