YRC Public Data Repository - Protein Structure Prediction

Protein:	PI3K_ARATH
Organism:	Arabidopsis thaliana
Length:	814 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PI3K_ARATH.

Description	E-value	Query Range	Subject Range
gi\|555700 - gi\|555700\|gb\|AAA83427.1\| phosphatidylinositol 3-kinase	722.0	[0..1]	[814..1]
PI3K2_SOYBN - Phosphatidylinositol 3-kinase, nodule isoform OS=Glycine max PE=2 SV=1	717.0	[0..1]	[814..1]
gi\|24711346 - gi\|24711346\|gb\|AAN62481.1\| phosphatidylinositol 3-kinase [Brassica napus]	716.0	[0..1]	[814..1]
gi\|27552468 - gi\|27552468\|emb\|CAD56881.1\| phosphatidylinositol 3-kinase [Medicago truncatula]	715.0	[0..1]	[814..1]
gi\|74418637 - gi\|74418637\|gb\|ABA03135.1\| phosphatidylinositol 3-kinase 1 [Phaseolus vulgaris]	709.0	[0..1]	[814..1]
gi\|58618123 - gi\|58618123\|gb\|AAW80628.1\| phosphoinositide 3-kinase [Nicotiana tabacum]	703.0	[0..1]	[814..1]
gi\|222630414, gi... - gi\|57900685\|gb\|AAW57810.1\| putative phosphatidylinositol 3-kinase [Oryza sativa Japonica Group], gi\|...	662.0	[0..2]	[814..3]
gi\|73961721 - gi\|73961721\|ref\|XP_547599.2\| PREDICTED: similar to phosphoinositide-3-kinase, class 3 [Canis familia...	650.0	[0..4]	[811..309]

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Predicted Domain #1

Region A:
Residues: [1-814]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGANEFRFFL SCDINSPVTF RIEKLDGNLP VKKSSDSGVV SIAEEKKPEL YIECALYIDG  60
   61 APFGLPMRTR LKTTGPPYCW NELITLSSKY RDLTAHSQLA ITVWDVSCGK TEGLIGGATV 120
  121 LLFNSKMQMK SGKQKLRLWQ GKEADGSFPT STPGKVPRHE RGELERLEKL MNKYERGQIQ 180
  181 SIDWLDRLML KSLDTIKEQE STKHGSSHLF VVIDFCSFEH RVVFQESGAN LFITAPIGST 240
  241 NEFVTVWDTE LGKTNPSENK QLKLARSLDR GIIDRDLKPS NIERKSIQRV LKYPPTRTLS 300
  301 GDERQLLWKF RFSLMSEKRA LTKFLRCVEW SDVQEAKQAI QLMYKWEMID VCDALELLSP 360
  361 LFESEEVRAY AVSVLERADD EELQCYLLQL VQALRFERSD RSCLSQFLVQ RALQNIELAS 420
  421 FLRWYVAVEL HDHVYAKRFY STYELLEENI IKLPPGVNGE DGYQLWQSLV RQTELTAQLC 480
  481 SITREVRNVR GNTQKKIEKL RQLLGGLLSE LTYFEEPIRS PLTPNVLIKG IVAGESSLFK 540
  541 SALHPLRLTF RTPEEGGSCK LIFKKGDDLR QDQLVVQMVW LMDRLLKLEN LDLCLTPYKV 600
  601 LATGHDEGML EFIPSRSLAQ ILSEHRSITS YLQKFHPDEH APFGITATCL DTFIKSCAGY 660
  661 SVITYILGIG DRHLDNLLLT DDGRLFHVDF AFILGRDPKP FPPPMKLCKE MVEAMGGAES 720
  721 QYYTRFKSYC CEAYNILRKS SNLILNLFHL MAGSTIPDIA SDPEKGILKL QEKFRLDMDD 780
  781 EACIHFFQDL INESVSALFP QMVETIHRWA QYWR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	151.0
Match:	2rd0A
Description:	No description for 2rd0A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.2	NCBI nr	03/2009
PSI-BLAST	2.2.22	FFAS	ffas03
PDB	10/2008	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits