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View Structure Prediction Details

Protein: PIP15_ARATH
Organism: Arabidopsis thaliana
Length: 287 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PIP15_ARATH.

Description E-value Query
Range
Subject
Range
gi|157351139, gi... - gi|225448357|ref|XP_002268084.1| PREDICTED: aquaporin-like [Vitis vinifera], gi|157351139|emb|CAO413...
gi|8071622 - gi|8071622|gb|AAF71817.1| putative aquaporin PIP1-1 [Vitis berlandieri x Vitis rupestris]
322.0 [0..1] [286..1]

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Predicted Domain #1
Region A:
Residues: [1-287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGKEEDVNV GANKFPERQP IGTAAQTESK DYKEPPPAPF FEPGELKSWS FYRAGIAEFI  60
   61 ATFLFLYVTV LTVMGVKRAP NMCASVGIQG IAWAFGGMIF ALVYCTAGIS GGHINPAVTF 120
  121 GLFLARKLSL TRALFYIVMQ CLGAICGAGV VKGFQPGLYQ TNGGGANVVA HGYTKGSGLG 180
  181 AEIVGTFVLV YTVFSATDAK RSARDSHVPI LAPLPIGFAV FLVHLATIPI TGTGINPARS 240
  241 LGAAIIYNKD HAWDDHWIFW VGPFIGAALA ALYHQIVIRA IPFKSKT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.39794
Match: 2b5fA
Description: Crystal structure of the spinach aquaporin SoPIP2;1 in an open conformation to 3.9 resolution
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle