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View Structure Prediction Details

Protein: PFD3_ARATH
Organism: Arabidopsis thaliana
Length: 195 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PFD3_ARATH.

Description E-value Query
Range
Subject
Range
gi|49074076, gi|... - gi|71018997|ref|XP_759729.1| hypothetical protein UM03582.1 [Ustilago maydis 521], ref|XP_401197.1| ...
208.0 [0..1] [178..1]

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Predicted Domain #1
Region A:
Residues: [1-195]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSSPSGSG SDLTERRGIP AAKFIQDVET YLSQSGLDPN SALAFHQERL QQYKVVEMKL  60
   61 LAQQRDLQAK IPDIEKCLEV VATLEAKKGT GEALLADFEV SEGIYSRACI EDTDSVCLWL 120
  121 GANVMLEYSC EEASALLKNN LENAKASLEV LVADLQFLRD QVTVTQVTIA RVYNWDVHQR 180
  181 RVKQVTPTAI AVADS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.221849
Match: 1fxkC
Description: Prefoldin alpha subunit
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle