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View Structure Prediction Details

Protein: PER4_ARATH
Organism: Arabidopsis thaliana
Length: 315 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER4_ARATH.

Description E-value Query
Range
Subject
Range
gi|2117621, gi|9... - gi|971560|emb|CAA62226.1| peroxidase1B [Medicago sativa], pir||JC4780 peroxidase (EC 1.11.1.7) 1B pr...
369.0 [0..1] [315..9]

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Predicted Domain #1
Region A:
Residues: [1-315]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIFKILVLL LSLCCFSQAQ LSPTFYDQTC QNALSTIRSS IRTAISRERR MAASLIRLHF  60
   61 HDCFVNGCDA SVMLVATPTM ESERDSLANF QSARGFEVID QAKSAVESVC PGVVSCADII 120
  121 AVAARDASEY VGGPRYDVKV GRRDSTNAFR AIADRDLPNF RASLNDLSEL FLRKGLNTRD 180
  181 LVALSGAHTL GQAQCLTFKG RLYDNSSDID AGFSSTRKRR CPVNGGDTTL APLDQVTPNS 240
  241 FDNNYYRNLM QKKGLLESDQ VLFGTGASTD SIVTEYSRNP SRFASDFSAA MIKMGDIQTL 300
  301 TGSDGQIRRI CSAVN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 94.0
Match: 1schA
Description: Plant peroxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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