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View Structure Prediction Details

Protein: PER1_ARATH, PER2...
Organism: Arabidopsis thaliana
Length: 325 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER1_ARATH, PER2....

Description E-value Query
Range
Subject
Range
gi|14031051 - gi|14031051|gb|AAK52085.1| peroxidase [Nicotiana tabacum]
375.0 [0..1] [325..1]

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Predicted Domain #1
Region A:
Residues: [1-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIKNILALV VLLSVVGVSV AIPQLLDLDY YRSKCPKAEE IVRGVTVQYV SRQKTLAAKL  60
   61 LRMHFHDCFV RGCDGSVLLK SAKNDAERDA VPNLTLKGYE VVDAAKTALE RKCPNLISCA 120
  121 DVLALVARDA VAVIGGPWWP VPLGRRDGRI SKLNDALLNL PSPFADIKTL KKNFANKGLN 180
  181 AKDLVVLSGG HTIGISSCAL VNSRLYNFTG KGDSDPSMNP SYVRELKRKC PPTDFRTSLN 240
  241 MDPGSALTFD THYFKVVAQK KGLFTSDSTL LDDIETKNYV QTQAILPPVF SSFNKDFSDS 300
  301 MVKLGFVQIL TGKNGEIRKR CAFPN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.39794
Match: 1pa2A
Description: Plant peroxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle