YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: PEAM3_ARATH
Organism: Arabidopsis thaliana
Length: 490 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for PEAM3_ARATH.

Predicted Domain #1
Region A:
Residues: [1-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASYGEEREI QKNYWKEHSV GLSVEAMMLD SKASDLDKEE RPEILAFLPP IEGTTVLEFG  60
   61 AGIGRFTTEL AQKAGQVIAV DFIESVIKKN ENINGHYKNV KFLCADVTSP NMNFPNESMD 120
  121 LIFSNWLLMY LSDQEVEDLA KKMLQWTKVG GYIFFRESCF HQSGDNKRKY NPTHYREPKF 180
  181 YTKLFKECHM NDEDGNSYEL SLVSCKCIGA YVRNK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.0
Match: 2pxxA
Description: No description for 2pxxA was found.

Predicted Domain #2
Region A:
Residues: [216-490]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNQNQICWLW QKVSSDNDRG FQRFLDNVQY KSSGILRYER VFGEGFVSTG GLETTKEFVD  60
   61 MLDLKPGQKV LDVGCGIGGG DFYMAENFDV DVVGIDLSVN MISFALEHAI GLKCSVEFEV 120
  121 ADCTKKEYPD NTFDVIYSRD TILHIQDKPA LFRRFYKWLK PGGKVLITDY CRSPKTPSPD 180
  181 FAIYIKKRGY DLHDVQAYGQ MLRDAGFEEV IAEDRTDQFM KVLKRELDAV EKEKEEFISD 240
  241 FSKEDYEDII GGWKSKLLRS SSGEQKWGLF IAKRN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.69897
Match: 1kp9A
Description: CmaA1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle