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View Structure Prediction Details

Protein: PEAM1_ARATH
Organism: Arabidopsis thaliana
Length: 491 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEAM1_ARATH.

Description E-value Query
Range
Subject
Range
gi|20260388 - gi|20260388|gb|AAM13092.1| unknown protein [Arabidopsis thaliana]
312.0 [0..1] [491..1]

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Predicted Domain #1
Region A:
Residues: [1-200]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASYEEERD IQKNYWIEHS ADLTVEAMML DSRASDLDKE ERPEVLSLLP PYEGKSVLEL  60
   61 GAGIGRFTGE LAQKAGELIA LDFIDNVIKK NESINGHYKN VKFMCADVTS PDLKITDGSL 120
  121 DLIFSNWLLM YLSDKEVELL AERMVGWIKV GGYIFFRESC FHQSGDSKRK SNPTHYREPR 180
  181 FYSKVFQECQ TRDAAGNSFE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.154902
Match: 2v74B
Description: No description for 2v74B was found.

Predicted Domain #2
Region A:
Residues: [201-491]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSMIGCKCIG AYVKNKKNQN QICWIWQKVS SENDRGFQRF LDNVQYKSSG ILRYERVFGQ  60
   61 GFVSTGGLET TKEFVEKMNL KPGQKVLDVG CGIGGGDFYM AEKFDVHVVG IDLSVNMISF 120
  121 ALERAIGLSC SVEFEVADCT TKHYPDNSFD VIYSRDTILH IQDKPALFRT FFKWLKPGGK 180
  181 VLISDYCRSP KTPSAEFSEY IKQRGYDLHD VQAYGQMLKD AGFTDVIAED RTDQFMQVLK 240
  241 RELDRVEKEK EKFISDFSKE DYDDIVGGWK SKLERCASDE QKWGLFIANK N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.522879
Match: 1kp9A
Description: CmaA1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity 0.444447673749491 bayes_pls_golite062009
catalytic activity 0.352837241386487 bayes_pls_golite062009
methyltransferase activity 0.0533354664784367 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.0416815045255102 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle