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View Structure Prediction Details

Protein: PLY7_ARATH
Organism: Arabidopsis thaliana
Length: 475 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLY7_ARATH.

Description E-value Query
Range
Subject
Range
gi|21536592 - gi|21536592|gb|AAM60924.1| putative pectate lyase [Arabidopsis thaliana]
506.0 [0..1] [475..1]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METARLFKLV CVICIASLIP TIRANVADET DEYWVNKANE ARKHTLMAYH PDPYEIVDHF  60
   61 HERHYDNSTD VEGTEEEKAV ASEEEDVIEM ISSPTNSTRR SLTGRG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 46.69897
Match: PF04431.4
Description: No description for PF04431.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [107-475]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGKGKGKWSK LTGPCTASNP IDKCWRCQPD WARRRKKLVH CVRGFGYRTT GGKRGRIYVV  60
   61 TSPRDDDMVN PRPGTLRHAV IQKEPLWIVF KHDMSIRLSQ ELMITSDKTI DARGANVHIA 120
  121 YGAGITMQYV HNIIIHGLHV HHIVKSSGGL IRDSINHFGH RGEADGDGIS IFGATNIWLD 180
  181 HISMSKCQDG LIDAIMGSTA ITISNSHFTH HNDVMLLGAQ NNNMDDKKMQ VTVAYNHFGK 240
  241 GLVQRMPRVR WGFVHVVNND YTHWELYAIG GSQGPTILSH GNRFIAPPHK QHYREVTKRD 300
  301 YASESEWKNW NWRSEKDVFM NNAYFRQSGN PHFKCSHSRQ QMIKPKNGMA VSKLTKYAGA 360
  361 LDCRVGKAC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.522879
Match: 1pxzA
Description: 1.7 Angstrom Crystal Structure of jun a 1, the major allergen from cedar pollen
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.142826098671881 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle