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View Structure Prediction Details

Protein: PER72_ARATH
Organism: Arabidopsis thaliana
Length: 336 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER72_ARATH.

Description E-value Query
Range
Subject
Range
gi|78499684 - gi|78499684|gb|ABB45838.1| hypothetical protein [Thellungiella halophila]
412.0 [0..1] [336..1]

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Predicted Domain #1
Region A:
Residues: [1-336]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSLNILIA ALSLIAFSPF CLCSKAYGSG GYLFPQFYDQ SCPKAQEIVQ SIVAKAFEHD  60
   61 PRMPASLLRL HFHDCFVKGC DASILLDSSG TIISEKRSNP NRNSARGFEL IEEIKHALEQ 120
  121 ECPETVSCAD ILALAARDST VITGGPSWEV PLGRRDARGA SLSGSNNDIP APNNTFQTIL 180
  181 TKFKRQGLDL VDLVSLSGSH TIGNSRCTSF RQRLYNQSGN GKPDMTLSQY YATLLRQRCP 240
  241 RSGGDQTLFF LDFATPFKFD NHYFKNLIMY KGLLSSDEIL FTKNKQSKEL VELYAENQEA 300
  301 FFEQFAKSMV KMGNISPLTG AKGEIRRICR RVNHAY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 100.0
Match: 1pa2A
Description: Plant peroxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle