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View Structure Prediction Details

Protein: PER55_ARATH
Organism: Arabidopsis thaliana
Length: 330 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER55_ARATH.

Description E-value Query
Range
Subject
Range
gi|2117621, gi|9... - gi|971560|emb|CAA62226.1| peroxidase1B [Medicago sativa], pir||JC4780 peroxidase (EC 1.11.1.7) 1B pr...
375.0 [0..4] [330..1]

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Predicted Domain #1
Region A:
Residues: [1-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIRSDDAKK PMMMWFLGML LFSMVAESNA QLSENYYAST CPSVELIVKQ AVTTKFKQTV  60
   61 TTAPATLRMF FHDCFVEGCD ASVFIASENE DAEKDADDNK SLAGDGFDTV IKAKTAVESQ 120
  121 CPGVVSCADI LALAARDVVV LVGGPEFKVE LGRRDGLVSK ASRVTGKLPE PGLDVRGLVQ 180
  181 IFASNGLSLT DMIALSGAHT IGSSHCNRFA NRLHNFSTFM PVDPTMDPVY AQQLIQACSD 240
  241 PNPDAVVDID LTSRDTFDNS YYQNLVARKG LFTSDQALFN DLSSQATVVR FANNAEEFYS 300
  301 AFSSAMRNLG RVGVKVGNQG EIRRDCSAFN 

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Detection Method: PSI-BLAST
Confidence: 91.69897
Match: 1pa2A
Description: Plant peroxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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