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View Structure Prediction Details

Protein: PER54_ARATH
Organism: Arabidopsis thaliana
Length: 358 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER54_ARATH.

Description E-value Query
Range
Subject
Range
gi|42494613, gi|... - gi|42494613|gb|AAS17637.1| peroxidase ATP29a [Arabidopsis thaliana], gi|21594792|gb|AAM66044.1| pero...
404.0 [0..1] [358..1]

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Predicted Domain #1
Region A:
Residues: [1-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVTSSSSTC DGFFIISLIV IVSSLFGTSS AQLNATFYSG TCPNASAIVR STIQQALQSD  60
   61 ARIGGSLIRL HFHDCFVNGC DGSLLLDDTS SIQSEKNAPA NANSTRGFNV VDSIKTALEN 120
  121 ACPGIVSCSD ILALASEASV SLAGGPSWTV LLGRRDGLTA NLSGANSSLP SPFEGLNNIT 180
  181 SKFVAVGLKT TDVVSLSGAH TFGRGQCVTF NNRLFNFNGT GNPDPTLNST LLSSLQQLCP 240
  241 QNGSNTGITN LDLSTPDAFD NNYFTNLQSN NGLLQSDQEL FSNTGSATVP IVNSFASNQT 300
  301 LFFEAFVQSM IKMGNISPLT GSSGEIRQDC KVVNGQSSAT EAGDIQLQSD GPVSVADM

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Detection Method: PSI-BLAST
Confidence: 101.0
Match: 1pa2A
Description: Plant peroxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle