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View Structure Prediction Details

Protein: PER50_ARATH
Organism: Arabidopsis thaliana
Length: 329 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER50_ARATH.

Description E-value Query
Range
Subject
Range
gi|39777532 - gi|39777532|gb|AAR31106.1| peroxidase precursor [Quercus suber]
368.0 [0..3] [329..9]

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Predicted Domain #1
Region A:
Residues: [1-329]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVVNKTNLL LLLLSLCLTL DLSSAQLRRN FYAGSCPNVE QIVRNAVQKK VQQTFTTIPA  60
   61 TLRLYFHDCF VNGCDASVMI ASTNNNKAEK DHEENLSLAG DGFDTVIKAK EALDAVPNCR 120
  121 NKVSCADILT MATRDVVNLA GGPQYDVELG RLDGLSSTAA SVGGKLPHPT DDVNKLTSLF 180
  181 AKNGLSLNDM IALSGAHTLG FAHCTKVFNR IYTFNKTTKV DPTVNKDYVT ELKASCPRNI 240
  241 DPRVAINMDP TTPRQFDNVY YKNLQQGKGL FTSDQVLFTD RRSKPTVDLW ANNGQLFNQA 300
  301 FINSMIKLGR VGVKTGSNGN IRRDCGAFN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 94.522879
Match: 1pa2A
Description: Plant peroxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle