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View Structure Prediction Details

Protein: PER38_ARATH
Organism: Arabidopsis thaliana
Length: 346 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER38_ARATH.

Description E-value Query
Range
Subject
Range
PER37_ARATH - Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1
388.0 [0..1] [346..1]

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Predicted Domain #1
Region A:
Residues: [1-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSSLIKLGF LLLLLQVSLS HAQLSPSFYD KTCPQVFDIV TNTIVNALRS DPRIAASILR  60
   61 LHFHDCFVNG CDASILLDNT TSFRTEKDAF GNANSARGFD VIDKMKAAIE KACPRTVSCA 120
  121 DMLAIAAKES IVLAGGPSWM VPNGRRDSLR GFMDLANDNL PGPSSTLKQL KDRFKNVGLD 180
  181 RSSDLVALSG GHTFGKSQCQ FIMDRLYNFG ETGLPDPTLD KSYLATLRKQ CPRNGNQSVL 240
  241 VDFDLRTPTL FDNKYYVNLK ENKGLIQSDQ ELFSSPDAAD TLPLVRAYAD GQGTFFDAFV 300
  301 KAIIRMSSLS PLTGKQGEIR LNCRVVNSKS KIMDVVDDAL EFASFM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 102.0
Match: 1w4wA
Description: Ferric horseradish peroxidase C1A in complex with formate
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle