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View Structure Prediction Details

Protein: PER34_ARATH
Organism: Arabidopsis thaliana
Length: 353 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER34_ARATH.

Description E-value Query
Range
Subject
Range
PER1A_ARMRU - Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2
415.0 [0..1] [353..1]

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Predicted Domain #1
Region A:
Residues: [1-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHFSSSSTSS TWTILITLGC LMLHASLSAA QLTPTFYDRS CPNVTNIVRE TIVNELRSDP  60
   61 RIAASILRLH FHDCFVNGCD ASILLDNTTS FRTEKDAFGN ANSARGFPVI DRMKAAVERA 120
  121 CPRTVSCADM LTIAAQQSVT LAGGPSWRVP LGRRDSLQAF LELANANLPA PFFTLPQLKA 180
  181 SFRNVGLDRP SDLVALSGGH TFGKNQCQFI LDRLYNFSNT GLPDPTLNTT YLQTLRGLCP 240
  241 LNGNRSALVD FDLRTPTVFD NKYYVNLKER KGLIQSDQEL FSSPNATDTI PLVRAYADGT 300
  301 QTFFNAFVEA MNRMGNITPT TGTQGQIRLN CRVVNSNSLL HDVVDIVDFV SSM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 110.0
Match: 1w4wA
Description: Ferric horseradish peroxidase C1A in complex with formate
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle