YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: PER31_ARATH
Organism: Arabidopsis thaliana
Length: 316 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER31_ARATH.

Description E-value Query
Range
Subject
Range
gi|2117621, gi|9... - gi|971560|emb|CAA62226.1| peroxidase1B [Medicago sativa], pir||JC4780 peroxidase (EC 1.11.1.7) 1B pr...
375.0 [0..1] [316..9]

Back

Predicted Domain #1
Region A:
Residues: [1-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLKSLFLL FLFFFTAQSR LTTNFYSKTC PRFLDIIRDT ITNKQITNPT TAAAVIRLFF  60
   61 HDCFPNGCDA SVLISSTAFN TAERDSSINL SLPGDGFDVI VRAKTALELA CPNTVSCSDI 120
  121 ISVATRDLLI TVGGPYYDVF LGRRDSRTSK SSLLTDLLPL PSTPISKIIQ QFESKGFTVQ 180
  181 EMVALSGAHS IGFSHCKEFV GRVGRNNTGY NPRFAVALKK ACANYPKDPT ISVFNDIMTP 240
  241 NKFDNMYYQN LKKGLGLLES DHGLYSDPRT RYFVDLYAKN QDLFFKDFAK AMQKLSLFGI 300
  301 QTGRRGEIRR RCDAIN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 94.39794
Match: 1gwoA
Description: Plant peroxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle