YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: PER30_ARATH
Organism: Arabidopsis thaliana
Length: 329 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER30_ARATH.

Description E-value Query
Range
Subject
Range
gi|2117621, gi|9... - gi|971560|emb|CAA62226.1| peroxidase1B [Medicago sativa], pir||JC4780 peroxidase (EC 1.11.1.7) 1B pr...
388.0 [0..1] [329..1]

Back

Predicted Domain #1
Region A:
Residues: [1-329]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTMTQLNIA VVVVVTVLIG MLRSSEAQLQ MNFYAKSCPN AEKIISDHIQ NHIHNGPSLA  60
   61 APLIRMHFHD CFVRGCDGSV LINSTSGNAE RDAPPNLTLR GFGFVERIKA LLEKVCPKTV 120
  121 SCADIIALTA RDAVVATGGP SWSVPTGRRD GRISNKTEAT NNIPPPTSNF TTLQRLFKNQ 180
  181 GLNLKDLVLL SGAHTIGVSH CSSMNTRLYN FSTTVKQDPS LDSQYAANLK ANKCKSLNDN 240
  241 STILEMDPGS SRSFDLSYYR LVLKRRGLFQ SDSALTTNSA TLKVINDLVN GSEKKFFKAF 300
  301 AKSMEKMGRV KVKTGSAGVI RTRCSVAGS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.522879
Match: 1gwtA
Description: Plant peroxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle