YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: PER27_ARATH
Organism: Arabidopsis thaliana
Length: 321 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER27_ARATH.

Description E-value Query
Range
Subject
Range
PER72_ARATH - Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1
358.0 [0..1] [321..1]

Back

Predicted Domain #1
Region A:
Residues: [1-321]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASKRLVVS CLFLVLLFAQ ANSQGLKVGF YSKTCPQLEG IVKKVVFDAM NKAPTLGAPL  60
   61 LRMFFHDCFV RGCDGSVLLD KPNNQGEKSA VPNLSLRGFG IIDDSKAALE KVCPGIVSCS 120
  121 DILALVARDA MVALEGPSWE VETGRRDGRV SNINEVNLPS PFDNITKLIS DFRSKGLNEK 180
  181 DLVILSGGHT IGMGHCPLLT NRLYNFTGKG DSDPSLDSEY AAKLRKKCKP TDTTTALEMD 240
  241 PGSFKTFDLS YFTLVAKRRG LFQSDAALLD NSKTRAYVLQ QIRTHGSMFF NDFGVSMVKM 300
  301 GRTGVLTGKA GEIRKTCRSA N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 89.69897
Match: 1pa2A
Description: Plant peroxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle