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View Structure Prediction Details

Protein: PER26_ARATH
Organism: Arabidopsis thaliana
Length: 335 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER26_ARATH.

Description E-value Query
Range
Subject
Range
gi|2117621, gi|9... - gi|971560|emb|CAA62226.1| peroxidase1B [Medicago sativa], pir||JC4780 peroxidase (EC 1.11.1.7) 1B pr...
372.0 [0..9] [335..3]

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Predicted Domain #1
Region A:
Residues: [1-335]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMIHIFLTV MVVGGVSLFP ETAEAIVMGP SMQKLTWHYY KVYNTCENAE NFVRHQVEIF  60
   61 YKNDKSIAPK LLRLLYSDCF VSGCDASVLL EGPNSEKMAP QNRGLGGFVL IDKIKIVLEQ 120
  121 RCPGVVSCAD ILNLATRDAV HLAGAPSYPV FTGRRDGLTS DKQTVDLPSP SISWDQAMSY 180
  181 FKSRGLNVLD MATLLGSHSM GRTHCSYVVD RLYNYNKTGK PSPTMNKYFL SEMAKQCPPR 240
  241 TRKGQTDPLV YLNPDSGSNH SFTSSFYSRI LSNKSVLEVD QQLLYNDDTK QISKEFSEGF 300
  301 EDFRKSFALS MSKMGAINVL TKTEGEIRKD CRHIN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 94.221849
Match: 1pa2A
Description: Plant peroxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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