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View Structure Prediction Details

Protein: PER23_ARATH
Organism: Arabidopsis thaliana
Length: 349 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER23_ARATH.

Description E-value Query
Range
Subject
Range
PER3_ARMRU - Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1
400.0 [0..1] [349..1]

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Predicted Domain #1
Region A:
Residues: [1-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFSSSLSCS AMGALIVGCL LLQASNSNAQ LRPDFYFRTC PPIFNIIGDT IVNELRTDPR  60
   61 IAASLLRLHF HDCFVRGCDA SILLDNSTSF RTEKDAAPNK NSVRGFDVID RMKAAIERAC 120
  121 PRTVSCADII TIASQISVLL SGGPWWPVPL GRRDSVEAFF ALANTALPSP FSTLTQLKTA 180
  181 FADVGLNRPS DLVALSGGHT FGKAQCQFVT PRLYNFNGTN RPDPSLNPTY LVELRRLCPQ 240
  241 NGNGTVLVNF DSVTPTTFDR QYYTNLLNGK GLIQSDQVLF STPGADTIPL VNQYSSNTFV 300
  301 FFGAFVDAMI RMGNLKPLTG TQGEIRQNCR VVNPRIRVVE NDDGVVSSI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 101.0
Match: 1w4wA
Description: Ferric horseradish peroxidase C1A in complex with formate
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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