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View Structure Prediction Details

Protein: PER20_ARATH
Organism: Arabidopsis thaliana
Length: 336 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER20_ARATH.

Description E-value Query
Range
Subject
Range
gi|2117621, gi|9... - gi|971560|emb|CAA62226.1| peroxidase1B [Medicago sativa], pir||JC4780 peroxidase (EC 1.11.1.7) 1B pr...
376.0 [0..4] [335..3]

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Predicted Domain #1
Region A:
Residues: [1-336]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIKQKKVWL SLIVLYAITT SVLGDFGEPL LKGFYKESCP LAEEIVKHNI EVAVLKDPRM  60
   61 AASLLRLQFH DCFVLGCDAS VLLDTHGDML SEKQATPNLN SLRGFEVIDY IKYLLEEACP 120
  121 LTVSCSDILA LAARDSVFLR GGPWWEVLLG RRDSLKASFA GANQFIPAPN SSLDSLIINF 180
  181 KQQGLNIQDL IALSGAHTIG KARCVSFKQR IVQPNMEQTF YVDEFRRHST FRRVLGSQCK 240
  241 DSSRDNELSP LDIKTPAYFD NHYFINLLEG RGLLISDNVL VSEDHEGEIF QKVWEYAVNQ 300
  301 DLFFIDFVES MLKMGNINVL TGIEGEIREN CRFVNI

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Detection Method: PSI-BLAST
Confidence: 95.522879
Match: 1pa2A
Description: Plant peroxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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