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View Structure Prediction Details

Protein: PER18_ARATH
Organism: Arabidopsis thaliana
Length: 329 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER18_ARATH.

Description E-value Query
Range
Subject
Range
gi|2117621, gi|9... - gi|971560|emb|CAA62226.1| peroxidase1B [Medicago sativa], pir||JC4780 peroxidase (EC 1.11.1.7) 1B pr...
386.0 [0..3] [329..1]

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Predicted Domain #1
Region A:
Residues: [1-329]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALQFFSCKP KYTFLSSLLL LLLLSSSVAE LSFNFYAGSC PGAELIVRNT VRSASSSDPS  60
   61 VLGKLLRLIF HDCFVQGCDG SVLIRGNGTE RSDPGNASLG GFAVIESVKN ILEIFCPGTV 120
  121 SCADILVLAA RDAVEALGGP VVPIPTGRRD GRVSMAANVR PNIIDTDFTV DKMINIFSSK 180
  181 GLSVHDLVVL SGAHTIGAAH CNTFNSRFKL DPKGNLELID ASLDNSYAQT LVNKCSSSLD 240
  241 PTTTVVDNDP ETSSTFDNQY YKNLLAHKGL FQTDSALMED DRTRKIVEIL ANDQESFFDR 300
  301 WTESFLKMSL MGVRVGEEGE IRRSCSAVN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.69897
Match: 1pa2A
Description: Plant peroxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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