YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: PER15_ARATH
Organism: Arabidopsis thaliana
Length: 338 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER15_ARATH.

Description E-value Query
Range
Subject
Range
PER72_ARATH - Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1
392.0 [0..4] [338..1]

Back

Predicted Domain #1
Region A:
Residues: [1-338]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARIGSFLII LYLIYALTLC ICDDDESNYG GDKGNLFPGF YRSSCPRAEE IVRSVVAKAV  60
   61 ARETRMAASL MRLHFHDCFV QGCDGSLLLD TSGSIVTEKN SNPNSRSARG FEVVDEIKAA 120
  121 LENECPNTVS CADALTLAAR DSSVLTGGPS WMVPLGRRDS TSASLSGSNN NIPAPNNTFN 180
  181 TIVTRFNNQG LDLTDVVALS GSHTIGFSRC TSFRQRLYNQ SGNGSPDRTL EQSYAANLRQ 240
  241 RCPRSGGDQN LSELDINSAG RFDNSYFKNL IENMGLLNSD EVLFSSNEQS RELVKKYAED 300
  301 QEEFFEQFAE SMIKMGNISP LTGSSGEIRK NCRKINNS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.0
Match: 1pa2A
Description: Plant peroxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle