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View Structure Prediction Details

Protein: PER12_ARATH
Organism: Arabidopsis thaliana
Length: 358 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER12_ARATH.

Description E-value Query
Range
Subject
Range
gi|1402914 - gi|1402914|emb|CAA66962.1| peroxidase [Arabidopsis thaliana]
402.0 [0..1] [358..1]

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Predicted Domain #1
Region A:
Residues: [1-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKAYSTRVL TFLILISLMA VTLNLFPTVE AKKRSRDAPI VKGLSWNFYQ KACPKVENII  60
   61 RKELKKVFKR DIGLAAAILR IHFHDCFVQG CEASVLLAGS ASGPGEQSSI PNLTLRQQAF 120
  121 VVINNLRALV QKKCGQVVSC SDILALAARD SVVLSGGPDY AVPLGRRDSL AFASQETTLN 180
  181 NLPPPFFNAS QLIADFANRN LNITDLVALS GGHTIGIAHC PSFTDRLYPN QDPTMNQFFA 240
  241 NSLKRTCPTA NSSNTQVNDI RSPDVFDNKY YVDLMNRQGL FTSDQDLFVD KRTRGIVESF 300
  301 AIDQQLFFDY FTVAMIKMGQ MSVLTGTQGE IRSNCSARNT QSFMSVLEEG IEEAISMI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.69897
Match: 1bgpA
Description: CRYSTAL STRUCTURE OF BARLEY GRAIN PEROXIDASE 1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle