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View Structure Prediction Details

Protein: PER11_ARATH
Organism: Arabidopsis thaliana
Length: 336 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER11_ARATH.

Description E-value Query
Range
Subject
Range
gi|2117621, gi|9... - gi|971560|emb|CAA62226.1| peroxidase1B [Medicago sativa], pir||JC4780 peroxidase (EC 1.11.1.7) 1B pr...
385.0 [0..2] [336..1]

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Predicted Domain #1
Region A:
Residues: [1-336]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRLLFVFFM VHTIFIPCFS FDTPGKDLPL TLDYYKSTCP TVFDVIKKEM ECIVKEDPRN  60
   61 AAIIIRLHFH DCFVQGCDGS VLLDETETLQ GEKKASPNIN SLKGYKIVDR IKNIIESECP 120
  121 GVVSCADLLT IGARDATILV GGPYWDVPVG RKDSKTASYE LATTNLPTPE EGLISIIAKF 180
  181 YSQGLSVEDM VALIGAHTIG KAQCRNFRSR IYGDFQVTSA LNPVSETYLA SLREICPASS 240
  241 GEGDSNVTAI DNVTPNLFDN SIYHTLLRGE GLLNSDQEMY TSLFGIQTRR IVSKYAEDPV 300
  301 AFFEQFSKSM VKMGNILNSE SLADGEVRRN CRFVNT

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Detection Method: PSI-BLAST
Confidence: 97.0
Match: 1gwtA
Description: Plant peroxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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