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View Structure Prediction Details

Protein: PER10_ARATH
Organism: Arabidopsis thaliana
Length: 350 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PER10_ARATH.

Description E-value Query
Range
Subject
Range
gi|1546702 - gi|1546702|emb|CAA67341.1| peroxidase; peroxidase ATP5a [Arabidopsis thaliana]
389.0 [0..1] [350..1]

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Predicted Domain #1
Region A:
Residues: [1-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHKMSMYLF VSYLAIFTLF FKGFVSSFPS GYNNGYNNGH GHGLTSNLNY RFYDRSCPRL  60
   61 QTIVKSGVWR AFKDDSRIAA SLLRLHFHDC FVNGCDGSIL LNDSEDFKGE KNAQPNRNSV 120
  121 RGFEVIEDIK SDIESSCPLT VSCADIVALA AREAVVLTGG PFWPVPLGRR DSLTASEQAA 180
  181 NTNLPSPFEA LENITAKFVT LGLDLKDVVV LSGAHTIGFA QCFVIKHRLF NFKGSGQPDP 240
  241 NLAASSALLS KLKDTCPNVD SSDSKLAALD AASSVKFDNA YYVNLMNNIG LLDSDQTLMT 300
  301 DPTAAALVKS YSENPYLFSR DFAVSMVKMG NIGVMTGSDG VIRGKCGFPG 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.154902
Match: 1pa2A
Description: Plant peroxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle