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View Structure Prediction Details

Protein: PDI12_ARATH
Organism: Arabidopsis thaliana
Length: 508 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PDI12_ARATH.

Description E-value Query
Range
Subject
Range
gi|77999357 - gi|77999357|gb|ABB17025.1| protein disulfide isomerase [Brassica carinata]
362.0 [0..1] [508..1]

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Predicted Domain #1
Region A:
Residues: [1-508]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFKGFACFS ILLLLSLFVS SIRSEETKEF VLTLDHSNFT ETISKHDFIV VEFYAPWCGH  60
   61 CQKLAPEYEK AASELSSHNP PLALAKIDAS EEANKEFANE YKIQGFPTLK ILRNGGKSVQ 120
  121 DYNGPREAEG IVTYLKKQSG PASVEIKSAD SATEVVGEKN VVAVGVFPKL SGDEFDSFMA 180
  181 LAEKLRADYD FAHTLDAKFL PRGESVEGPA VRLFKPFDEL FVDSKDFNGE ALEKFVKESS 240
  241 IPLVTVFDSD PNNHPYVAKF FESPATKAMM FVNFTGATAE ALKSKYREVA TSNKDQSLAF 300
  301 LVGDAESSQG AFQYFGLEES QVPLIIIQTP DNKKYLKVNV EVDQIESWFK DFQDGKVAVH 360
  361 KKSQPIPAEN NEPVKVVVAE SLDDIVFKSG KNVLIEFYAP WCGHCQKLAP ILDEVALSFQ 420
  421 NDPSVIIAKL DATANDIPSD TFDVKGFPTI YFRSASGNVV VYEGDRTKED FINFVEKNSE 480
  481 KKPTSHGEES TKSEEPKKTE ETAAKDEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.30103
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle