YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: P2C37_ARATH
Organism: Arabidopsis thaliana
Length: 399 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P2C37_ARATH.

Description E-value Query
Range
Subject
Range
gi|10432446, gi|... - gi|22553023|emb|CAC84141.2| protein phosphatase 2C [Nicotiana tabacum], gi|10432446|emb|CAC10358.1| ...
265.0 [0..1] [391..1]

Back

Predicted Domain #1
Region A:
Residues: [1-101]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGICCGVVG ETEPAAPVDS TSRASLRRRL DLLPSIKIVA DSAVAPPLEN CRKRQKRETV  60
   61 VLSTLPGNLD LDSNVRSENK KARSAVTNSN SVTEAESFFS D

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [102-399]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPKIGTTSVC GRRRDMEDAV SIHPSFLQRN SENHHFYGVF DGHGCSHVAE KCRERLHDIV  60
   61 KKEVEVMASD EWTETMVKSF QKMDKEVSQR ECNLVVNGAT RSMKNSCRCE LQSPQCDAVG 120
  121 STAVVSVVTP EKIIVSNCGD SRAVLCRNGV AIPLSVDHKP DRPDELIRIQ QAGGRVIYWD 180
  181 GARVLGVLAM SRAIGDNYLK PYVIPDPEVT VTDRTDEDEC LILASDGLWD VVPNETACGV 240
  241 ARMCLRGAGA GDDSDAAHNA CSDAALLLTK LALARQSSDN VSVVVVDLRK RRNNQASS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.69897
Match: 2p8eA
Description: No description for 2p8eA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle