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View Structure Prediction Details

Protein: P2C56_ARATH
Organism: Arabidopsis thaliana
Length: 434 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P2C56_ARATH.

Description E-value Query
Range
Subject
Range
gi|509419 - gi|509419|emb|CAA55484.1| ABI1 [Arabidopsis thaliana]
381.0 [0..1] [434..1]
gi|68394439 - gi|68394439|ref|XP_685043.1| PREDICTED: protein phosphatase type 2C alpha 1 [Danio rerio]
243.0 [0..3] [433..12]
gi|49256034, gi|... - gi|49256034|gb|AAH71108.1| MGC81273 protein [Xenopus laevis], gi|148227634|ref|NP_001085342.1| MGC81...
243.0 [0..111] [433..6]
P2C53_ORYSJ - Probable protein phosphatase 2C 53 OS=Oryza sativa subsp. japonica GN=Os05g0592800 PE=2 SV=1
242.0 [0..116] [432..112]
gi|51704009, gi|... - gi|89268278|emb|CAJ81612.1| protein phosphatase 1B, magnesium-dependent, beta isoform [Xenopus tropi...
242.0 [0..111] [433..6]

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Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEVSPAIAG PFRPFSETQM DFTGIRLGKG YCNNQYSNQD SENGDLMVSL PETSSCSVSG  60
   61 SHGSESRKVL ISRINSPNLN MKESAAADIV VVDISAGDEI NGSDITS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [108-434]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKKMISRTES RSLFEFKSVP LYGFTSICGR RPEMEDAVST IPRFLQSSSG SMLDGRFDPQ  60
   61 SAAHFFGVYD GHGGSQVANY CRERMHLALA EEIAKEKPML CDGDTWLEKW KKALFNSFLR 120
  121 VDSEIESVAP ETVGSTSVVA VVFPSHIFVA NCGDSRAVLC RGKTALPLSV DHKPDREDEA 180
  181 ARIEAAGGKV IQWNGARVFG VLAMSRSIGD RYLKPSIIPD PEVTAVKRVK EDDCLILASD 240
  241 GVWDVMTDEE ACEMARKRIL LWHKKNAVAG DASLLADERR KEGKDPAAMS AAEYLSKLAI 300
  301 QRGSKDNISV VVVDLKPRRK LKSKPLN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.69897
Match: 1a6qA
Description: CRYSTAL STRUCTURE OF THE PROTEIN SERINE/THREONINE PHOSPHATASE 2C AT 2 A RESOLUTION
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle