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View Structure Prediction Details

Protein: OSL3_ARATH
Organism: Arabidopsis thaliana
Length: 244 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OSL3_ARATH.

Description E-value Query
Range
Subject
Range
gi|33589680, gi|... - gi|33589680|gb|AAQ22606.1| At4g11650 [Arabidopsis thaliana], gi|110736501|dbj|BAF00218.1| osmotin pr...
374.0 [0..1] [244..1]

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Predicted Domain #1
Region A:
Residues: [1-244]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANLLVSTFI FSALLLISTA TAATFEILNQ CSYTVWAAAS PGGGRRLDAG QSWRLDVAAG  60
   61 TKMARIWGRT NCNFDSSGRG RCQTGDCSGG LQCTGWGQPP NTLAEYALNQ FNNLDFYDIS 120
  121 LVDGFNIPME FSPTSSNCHR ILCTADINGQ CPNVLRAPGG CNNPCTVFQT NQYCCTNGQG 180
  181 SCSDTEYSRF FKQRCPDAYS YPQDDPTSTF TCTNTNYRVV FCPRSRLGAT GSHQLPIKMV 240
  241 TEEN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 84.30103
Match: 1z3qA
Description: Resolution of the structure of the allergenic and antifungal banana fruit thaumatin-like protein at 1.7A
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle