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View Structure Prediction Details

Protein: OLEO4_ARATH
Organism: Arabidopsis thaliana
Length: 191 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OLEO4_ARATH.

Description E-value Query
Range
Subject
Range
gi|1592686 - gi|1592686|emb|CAA63011.1| oleosin type4 [Arabidopsis thaliana]
217.0 [0..1] [190..1]

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Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANVDRDRRV HVDRTDKRVH QPNYEDDVGF GGYGGYGAGS DYKSRGPSTN QILALIAGVP  60
   61 IGGTLLTLAG LTLAGSVIGL LVSIPLFLLF 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [91-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPVIVPAALT IGLAVTGILA SGLFGLTGLS SVSWVLNYLR GTSDTVPEQL DYAKRRMADA  60
   61 VGYAGMKGKE MGQYVQDKAH EARETEFMTE THEPGKARRG S

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.971
Match: 1oedA
Description: Acetylcholine receptor protein, alpha chain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle