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View Structure Prediction Details

Protein: OLEO2_ARATH
Organism: Arabidopsis thaliana
Length: 199 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OLEO2_ARATH.

Description E-value Query
Range
Subject
Range
gi|2129658, gi|1... - pir||S71253 oleosin, 21K - Arabidopsis thaliana, gi|1107497|emb|CAA63022.1| oleosin type2 [Arabidops...
225.0 [0..1] [199..1]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADTHRVDRT DRHFQFQSPY EGGRGQGQYE GDRGYGGGGY KSMMPESGPS STQVLSLLIG  60
   61 VPVVGSLLAL AGLLLAGSVI GLMVALPLFL LF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [93-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPVIVPAALT IGLAMTGFLA SGMFGLTGLS SISWVMNYLR GTRRTVPEQL EYAKRRMADA  60
   61 VGYAGQKGKE MGQHVQNKAQ DVKQYDISKP HDTTTKGHET QGRTTAA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.988
Match: 1oedA
Description: Acetylcholine receptor protein, alpha chain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle