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View Structure Prediction Details

Protein: NRAM4_ARATH
Organism: Arabidopsis thaliana
Length: 512 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NRAM4_ARATH.

Description E-value Query
Range
Subject
Range
gi|73996656 - gi|73996656|ref|XP_543669.2| PREDICTED: similar to solute carrier family 11 (proton-coupled divalent...
288.0 [0..2] [507..210]

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Predicted Domain #1
Region A:
Residues: [1-512]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSETDRERPL LASEERAYEE TEKVLIVGID EEEDADYDDD PGNSPKFSWK KLWLFTGPGF  60
   61 LMSIAFLDPG NLESDLQAGA IAGYSLIWLL MWATAIGLLI QLLSARLGVA TGRHLAELCR 120
  121 EEYPTWARMV LWIMAEIALI GADIQEVIGS AIAIKILSNG LVPLWAGVVI TALDCFIFLF 180
  181 LENYGIRKLE AVFAILIATM ALAFAWMFGQ TKPSGTELLV GALVPKLSSR TIKQAVGIVG 240
  241 CIIMPHNVFL HSALVQSREV DPKKRFRVKE ALKYYSIEST GALAVSFIIN VFVTTVFAKS 300
  301 FYGTEIADTI GLANAGQYLQ DKYGGGFFPI LYIWAIGVLA AGQSSTITGT YAGQFIMGGF 360
  361 LNLKMKKWVR ALITRSCAII PTMIVALVFD SSDSMLDELN EWLNVLQSVQ IPFAVIPLLC 420
  421 LVSNEQIMGS FKIQPLVQTI SWIVAALVIA INGYLMVDFF SGAATNLILL VPVIIFAIAY 480
  481 VVFVLYLISR GLTYTPWQLV ASSHKEPQRD DE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.57
Match: 2a65A
Description: Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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