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View Structure Prediction Details

Protein: NRAM1_ARATH
Organism: Arabidopsis thaliana
Length: 532 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NRAM1_ARATH.

Description E-value Query
Range
Subject
Range
gi|5853313 - gi|5853313|gb|AAD54417.1| metal ion transporter [Arabidopsis thaliana]
298.0 [0..1] [532..1]

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Predicted Domain #1
Region A:
Residues: [1-532]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATGSGRSQ FISSSGGNRS FSNSPLIENS DSNQIIVSEK KSWKNFFAYL GPGFLVSIAY  60
   61 IDPGNFETDL QAGAHYKYEL LWIILVASCA ALVIQSLAAN LGVVTGKHLA EQCRAEYSKV 120
  121 PNFMLWVVAE IAVVACDIPE VIGTAFALNM LFSIPVWIGV LLTGLSTLIL LALQKYGVRK 180
  181 LEFLIAFLVF TIAICFFVEL HYSKPDPGEV LHGLFVPQLK GNGATGLAIS LLGAMVMPHN 240
  241 LFLHSALVLS RKIPRSASGI KEACRFYLIE SGLALMVAFL INVSVISVSG AVCNAPNLSP 300
  301 EDRANCEDLD LNKASFLLRN VVGKWSSKLF AIALLASGQS STITGTYAGQ YVMQGFLDLR 360
  361 LEPWLRNLLT RCLAIIPSLI VALIGGSAGA GKLIIIASMI LSFELPFALV PLLKFTSCKT 420
  421 KMGSHVNPMA ITALTWVIGG LIMGINIYYL VSSFIKLLIH SHMKLILVVF CGILGFAGIA 480
  481 LYLAAIAYLV FRKNRVATSL LISRDSQNVE TLPRQDIVNM QLPCRVSTSD VD

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.81
Match: 2a65A
Description: Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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