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View Structure Prediction Details

Protein: NRL2_ARATH
Organism: Arabidopsis thaliana
Length: 339 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NRL2_ARATH.

Description E-value Query
Range
Subject
Range
gi|6624886, gi|2... - gi|6624886|emb|CAA68934.3| nitrilase 2 [Arabidopsis thaliana], pir||T52259 nitrilase (EC 3.5.5.1) 2 ...
336.0 [0..1] [339..1]

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Predicted Domain #1
Region A:
Residues: [1-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSENTPFN GVASSTIVRA TIVQASTVYN DTPATLEKAN KFIVEAASKG SELVVFPEAF  60
   61 IGGYPRGFRF GLGVGVHNEE GRDEFRKYHA SAIKVPGPEV EKLAELAGKN NVYLVMGAIE 120
  121 KDGYTLYCTA LFFSPQGQFL GKHRKLMPTS LERCIWGQGD GSTIPVYDTP IGKLGAAICW 180
  181 ENRMPLYRTA LYAKGIELYC APTADGSKEW QSSMLHIAIE GGCFVLSACQ FCLRKDFPDH 240
  241 PDYLFTDWYD DKEPDSIVSQ GGSVIISPLG QVLAGPNFES EGLITADLDL GDVARAKLYF 300
  301 DSVGHYSRPD VLHLTVNEHP KKPVTFISKV EKAEDDSNK

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Detection Method: PSI-BLAST
Confidence: 55.221849
Match: 1emsA
Description: NIT-FHIT fusion protein, C-terminal domain; NIT-FHIT fusion protein, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 2.08563993959019 bayes_pls_golite062009
catalytic activity 1.64442398754697 bayes_pls_golite062009
binding 1.15557693954948 bayes_pls_golite062009
protein binding 0.276768866737717 bayes_pls_golite062009
hydrolase activity 0.056614713418243 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle